Dca47718.1
Annotation
- 3-exons
- f-1
- sp|Q4JFW8_SOLLC#Green flesh protein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#Name=SGR1#unknown#0F0P0C
- Repeat List (scaffold582)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47718.1 |
1 |
225 |
226 |
69.46 |
225 |
68 |
4e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q4JFW8_SOLLC |
40 |
270 |
272 |
84.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47718.1 |
1 |
211 |
226 |
65.92 |
211 |
71 |
1e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G22920.1 |
48 |
247 |
268 |
74.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold582 |
Augus-PASA |
mRNA |
79357 |
80683 |
. |
+ |
. |
ID=Dca47718.1;Parent=Dca47718 |
| scaffold582 |
Augus-PASA |
exon |
79357 |
79533 |
. |
+ |
. |
ID=Dca47718.1.exon1;Parent=Dca47718.1 |
| scaffold582 |
Augus-PASA |
exon |
79741 |
79908 |
. |
+ |
. |
ID=Dca47718.1.exon2;Parent=Dca47718.1 |
| scaffold582 |
Augus-PASA |
exon |
80348 |
80683 |
. |
+ |
. |
ID=Dca47718.1.exon3;Parent=Dca47718.1 |
