Carnation DB

Dca47776.1

Annotation

13-exons
f-1
sp|F6HIC3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0059g00800#GO:0005524;GO:0003677;GO:0004386;GO:0008270#4F0P0C
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain | chr1:1471624-1476067 REVERSE LENGTH=833
Repeat List (scaffold583)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47776.1	60	726	738	49.59	667	48	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HIC3_VITVI	158	930	936	82.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47776.1	36	726	738	47.69	691	46	0
Target_name	Start	End	Length	Cov(%)
AT1G05120.1	63	827	833	91.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold583	Augustus	mRNA	32281	39095	.	+	.	ID=Dca47776.1;Parent=Dca47776
scaffold583	Augustus	exon	32281	33195	.	+	.	ID=Dca47776.1.exon1;Parent=Dca47776.1
scaffold583	Augustus	exon	33644	33771	.	+	.	ID=Dca47776.1.exon2;Parent=Dca47776.1
scaffold583	Augustus	exon	33993	34083	.	+	.	ID=Dca47776.1.exon3;Parent=Dca47776.1
scaffold583	Augustus	exon	34830	34976	.	+	.	ID=Dca47776.1.exon4;Parent=Dca47776.1
scaffold583	Augustus	exon	35065	35150	.	+	.	ID=Dca47776.1.exon5;Parent=Dca47776.1
scaffold583	Augustus	exon	35526	35595	.	+	.	ID=Dca47776.1.exon6;Parent=Dca47776.1
scaffold583	Augustus	exon	36727	36837	.	+	.	ID=Dca47776.1.exon7;Parent=Dca47776.1
scaffold583	Augustus	exon	37089	37319	.	+	.	ID=Dca47776.1.exon8;Parent=Dca47776.1
scaffold583	Augustus	exon	37799	37903	.	+	.	ID=Dca47776.1.exon9;Parent=Dca47776.1
scaffold583	Augustus	exon	38009	38161	.	+	.	ID=Dca47776.1.exon10;Parent=Dca47776.1
scaffold583	Augustus	exon	38494	38582	.	+	.	ID=Dca47776.1.exon11;Parent=Dca47776.1
scaffold583	Augustus	exon	38897	38970	.	+	.	ID=Dca47776.1.exon12;Parent=Dca47776.1
scaffold583	Augustus	exon	39079	39095	.	+	.	ID=Dca47776.1.exon13;Parent=Dca47776.1