Carnation DB

Dca47790.1

Annotation

5-exons
f-1
sp|Q8LR94_ORYSJ#Os01g0805200 protein#Oryza sativa subsp japonica (Rice)#Name=P0034E02.54#unknown#0F0P0C
Repeat List (scaffold5830)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47790.1	24	162	168	57.73	139	70	2e-50
Target_name	Start	End	Length	Cov(%)
sp\|Q8LR94_ORYSJ	48	186	209	66.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47790.1	24	162	168	57.73	139	70	2e-51
Target_name	Start	End	Length	Cov(%)
Os01t0805200-02	48	186	210	66.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5830	Augustus	mRNA	7288	9317	.	-	.	ID=Dca47790.1;Parent=Dca47790
scaffold5830	Augustus	exon	7288	7377	.	-	.	ID=Dca47790.1.exon1;Parent=Dca47790.1
scaffold5830	Augustus	exon	7611	7769	.	-	.	ID=Dca47790.1.exon2;Parent=Dca47790.1
scaffold5830	Augustus	exon	8051	8137	.	-	.	ID=Dca47790.1.exon3;Parent=Dca47790.1
scaffold5830	Augustus	exon	8724	8878	.	-	.	ID=Dca47790.1.exon4;Parent=Dca47790.1
scaffold5830	Augustus	exon	9302	9317	.	-	.	ID=Dca47790.1.exon5;Parent=Dca47790.1