Carnation DB

Dca47815.1

Annotation

8-exons
f-1
sp|F6HFL1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g04450#GO:0016020;GO:0015297;GO:0015238#2F0P1C
AT1G71140.1 | Symbols: | MATE efflux family protein | chr1:26824762-26826748 FORWARD LENGTH=485
Repeat List (scaffold584)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47815.1	1	518	529	63.89	518	66	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HFL1_VITVI	1	478	481	99.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47815.1	11	509	529	52.93	499	57	1e-158
Target_name	Start	End	Length	Cov(%)
AT1G71140.1	12	467	485	94.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold584	Augustus	mRNA	4397	15897	.	+	.	ID=Dca47815.1;Parent=Dca47815
scaffold584	Augustus	exon	4397	4654	.	+	.	ID=Dca47815.1.exon1;Parent=Dca47815.1
scaffold584	Augustus	exon	8950	9060	.	+	.	ID=Dca47815.1.exon2;Parent=Dca47815.1
scaffold584	Augustus	exon	14173	14717	.	+	.	ID=Dca47815.1.exon3;Parent=Dca47815.1
scaffold584	Augustus	exon	14811	14897	.	+	.	ID=Dca47815.1.exon4;Parent=Dca47815.1
scaffold584	Augustus	exon	14989	15045	.	+	.	ID=Dca47815.1.exon5;Parent=Dca47815.1
scaffold584	Augustus	exon	15153	15391	.	+	.	ID=Dca47815.1.exon6;Parent=Dca47815.1
scaffold584	Augustus	exon	15479	15684	.	+	.	ID=Dca47815.1.exon7;Parent=Dca47815.1
scaffold584	Augustus	exon	15811	15897	.	+	.	ID=Dca47815.1.exon8;Parent=Dca47815.1