Carnation DB

Dca47822.1

Annotation

9-exons
f-1
sp|F6HBF5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0064g00980#GO:0005634;GO:0003677;GO:0003723;GO:0003721;GO:0006278#3F1P1C
sp|B5B378_CARPA#Telomerase reverse transcriptase#Carica papaya (Papaya)#Name=TERT#GO:0005634;GO:0003677;GO:0003723;GO:0003721;GO:0006278#3F1P1C
Repeat List (scaffold584)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47822.1	317	1060	1060	35.28	744	49	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HBF5_VITVI	158	895	895	82.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47822.1	3	182	1060	6.03	180	31	6e-18
Target_name	Start	End	Length	Cov(%)
AT5G16850.1	6	187	1123	16.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold584	Augustus	mRNA	82501	90497	.	+	.	ID=Dca47822.1;Parent=Dca47822
scaffold584	Augustus	exon	82501	82800	.	+	.	ID=Dca47822.1.exon1;Parent=Dca47822.1
scaffold584	Augustus	exon	83007	83048	.	+	.	ID=Dca47822.1.exon2;Parent=Dca47822.1
scaffold584	Augustus	exon	83280	83363	.	+	.	ID=Dca47822.1.exon3;Parent=Dca47822.1
scaffold584	Augustus	exon	83944	84094	.	+	.	ID=Dca47822.1.exon4;Parent=Dca47822.1
scaffold584	Augustus	exon	84783	85099	.	+	.	ID=Dca47822.1.exon5;Parent=Dca47822.1
scaffold584	Augustus	exon	87212	88408	.	+	.	ID=Dca47822.1.exon6;Parent=Dca47822.1
scaffold584	Augustus	exon	88685	89232	.	+	.	ID=Dca47822.1.exon7;Parent=Dca47822.1
scaffold584	Augustus	exon	89821	90093	.	+	.	ID=Dca47822.1.exon8;Parent=Dca47822.1
scaffold584	Augustus	exon	90227	90497	.	+	.	ID=Dca47822.1.exon9;Parent=Dca47822.1