Carnation DB

Dca47843.1

Annotation

5-exons
f-1
sp|Q547W6_HEVBR#Hydroxymethylglutaryl coenzyme A reductase#Hevea brasiliensis (Para rubber tree) (Siphonia brasiliensis)#unknown#GO:0016021;GO:0004420;GO:0050661;GO:0015936;GO:0008299#2F2P1C
Repeat List (scaffold5846)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47843.1	16	243	768	18.22	228	60	5e-70
Target_name	Start	End	Length	Cov(%)
sp\|Q547W6_HEVBR	3	228	575	39.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47843.1	1	243	768	17.7	243	54	3e-70
Target_name	Start	End	Length	Cov(%)
AT1G76490.1	51	289	642	37.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5846	Augus-PASA	mRNA	6323	12339	.	-	.	ID=Dca47843.1;Parent=Dca47843
scaffold5846	Augus-PASA	exon	6323	6565	.	-	.	ID=Dca47843.1.exon1;Parent=Dca47843.1
scaffold5846	Augus-PASA	exon	7183	7529	.	-	.	ID=Dca47843.1.exon2;Parent=Dca47843.1
scaffold5846	Augus-PASA	exon	7818	7999	.	-	.	ID=Dca47843.1.exon3;Parent=Dca47843.1
scaffold5846	Augustus	exon	9042	9853	.	-	.	ID=Dca47843.1.exon4;Parent=Dca47843.1
scaffold5846	Augustus	exon	11617	12339	.	-	.	ID=Dca47843.1.exon5;Parent=Dca47843.1