Carnation DB

Dca47844.1

Annotation

6-exons
f-1
sp|B9HPM3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_803959#GO:0005086;GO:0005488;GO:0032012#2F1P0C
AT4G38200.1 | Symbols: | SEC7-like guanine nucleotide exchange family protein | chr4:17915293-17922502 FORWARD LENGTH=1687
Repeat List (scaffold5846)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47844.1	1	852	854	63.23	852	60	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HPM3_POPTR	834	1729	1729	51.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47844.1	1	853	854	58.54	853	56	0
Target_name	Start	End	Length	Cov(%)
AT4G38200.1	798	1687	1687	52.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5846	Augustus	mRNA	15448	19244	.	-	.	ID=Dca47844.1;Parent=Dca47844
scaffold5846	Augustus	exon	15448	16059	.	-	.	ID=Dca47844.1.exon1;Parent=Dca47844.1
scaffold5846	Augustus	exon	16192	16847	.	-	.	ID=Dca47844.1.exon2;Parent=Dca47844.1
scaffold5846	Augustus	exon	16959	17292	.	-	.	ID=Dca47844.1.exon3;Parent=Dca47844.1
scaffold5846	Augustus	exon	17713	17975	.	-	.	ID=Dca47844.1.exon4;Parent=Dca47844.1
scaffold5846	Augustus	exon	18247	18715	.	-	.	ID=Dca47844.1.exon5;Parent=Dca47844.1
scaffold5846	Augustus	exon	19014	19244	.	-	.	ID=Dca47844.1.exon6;Parent=Dca47844.1