Carnation DB

Dca47879.1

Annotation

11-exons
f-1
sp|A5BX89_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g06550#GO:0003676;GO:0008270#2F0P0C
AT5G58760.1 | Symbols: DDB2 | damaged DNA binding 2 | chr5:23730741-23733606 REVERSE LENGTH=557
Repeat List (scaffold585)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47879.1	65	525	555	61.62	461	74	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BX89_VITVI	63	521	559	82.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47879.1	4	514	555	60.72	511	66	0
Target_name	Start	End	Length	Cov(%)
AT5G58760.1	5	512	557	91.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold585	Augustus	mRNA	189937	194005	.	+	.	ID=Dca47879.1;Parent=Dca47879
scaffold585	Augustus	exon	189937	190167	.	+	.	ID=Dca47879.1.exon1;Parent=Dca47879.1
scaffold585	Augustus	exon	190678	190768	.	+	.	ID=Dca47879.1.exon2;Parent=Dca47879.1
scaffold585	Augustus	exon	191362	191489	.	+	.	ID=Dca47879.1.exon3;Parent=Dca47879.1
scaffold585	Augustus	exon	191611	191733	.	+	.	ID=Dca47879.1.exon4;Parent=Dca47879.1
scaffold585	Augustus	exon	191868	191956	.	+	.	ID=Dca47879.1.exon5;Parent=Dca47879.1
scaffold585	Augustus	exon	192092	192212	.	+	.	ID=Dca47879.1.exon6;Parent=Dca47879.1
scaffold585	Augustus	exon	192367	192467	.	+	.	ID=Dca47879.1.exon7;Parent=Dca47879.1
scaffold585	Augustus	exon	192581	192710	.	+	.	ID=Dca47879.1.exon8;Parent=Dca47879.1
scaffold585	Augustus	exon	192899	193147	.	+	.	ID=Dca47879.1.exon9;Parent=Dca47879.1
scaffold585	Augustus	exon	193235	193431	.	+	.	ID=Dca47879.1.exon10;Parent=Dca47879.1
scaffold585	Augustus	exon	193798	194005	.	+	.	ID=Dca47879.1.exon11;Parent=Dca47879.1