Dca47896.1
Annotation
- 2-exons
- f-1
- sp|O49140_ARATH#Polyprotein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5854)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47896.1 |
4 |
160 |
182 |
59.89 |
157 |
70 |
4e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O49140_ARATH |
1283 |
1439 |
1451 |
10.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47896.1 |
1 |
157 |
182 |
36.81 |
157 |
43 |
2e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1227 |
1383 |
1401 |
11.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5854 |
Augustus |
mRNA |
28094 |
29191 |
. |
+ |
. |
ID=Dca47896.1;Parent=Dca47896 |
| scaffold5854 |
Augustus |
exon |
28094 |
28560 |
. |
+ |
. |
ID=Dca47896.1.exon1;Parent=Dca47896.1 |
| scaffold5854 |
Augustus |
exon |
29110 |
29191 |
. |
+ |
. |
ID=Dca47896.1.exon2;Parent=Dca47896.1 |
