Dca47931.1
Annotation
- 3-exons
- f-1
- sp|F6HNY2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g01180#GO:0043169;GO:0004553;GO:0005975#2F1P0C
- sp|B9GJN3_POPTR#Glycoside hydrolase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_845826#GO:0043169;GO:0004553;GO:0005975#2F1P0C
- Repeat List (scaffold5863)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47931.1 |
15 |
453 |
466 |
57.29 |
439 |
61 |
3e-159
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HNY2_VITVI |
13 |
440 |
447 |
95.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47931.1 |
13 |
453 |
466 |
51.28 |
441 |
54 |
5e-136
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G55430.1 |
15 |
444 |
449 |
95.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5863 |
Augustus |
mRNA |
8545 |
10632 |
. |
+ |
. |
ID=Dca47931.1;Parent=Dca47931 |
| scaffold5863 |
Augustus |
exon |
8545 |
9012 |
. |
+ |
. |
ID=Dca47931.1.exon1;Parent=Dca47931.1 |
| scaffold5863 |
Augustus |
exon |
9548 |
10132 |
. |
+ |
. |
ID=Dca47931.1.exon2;Parent=Dca47931.1 |
| scaffold5863 |
Augustus |
exon |
10285 |
10632 |
. |
+ |
. |
ID=Dca47931.1.exon3;Parent=Dca47931.1 |
