Dca47940.1
Annotation
- 4-exons
- f-1
- sp|B9RFK1_RICCO#Pectinesterase-2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1435360#GO:0005618;GO:0045330;GO:0030599;GO:0042545#2F1P1C
- Repeat List (scaffold5864)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47940.1 |
1 |
206 |
233 |
46.78 |
206 |
52 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RFK1_RICCO |
106 |
316 |
336 |
62.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47940.1 |
1 |
221 |
233 |
44.63 |
221 |
46 |
2e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G24130.1 |
107 |
332 |
335 |
67.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5864 |
Augustus |
mRNA |
26920 |
28228 |
. |
+ |
. |
ID=Dca47940.1;Parent=Dca47940 |
| scaffold5864 |
Augustus |
exon |
26920 |
26976 |
. |
+ |
. |
ID=Dca47940.1.exon1;Parent=Dca47940.1 |
| scaffold5864 |
Augustus |
exon |
27059 |
27256 |
. |
+ |
. |
ID=Dca47940.1.exon2;Parent=Dca47940.1 |
| scaffold5864 |
Augustus |
exon |
27340 |
27590 |
. |
+ |
. |
ID=Dca47940.1.exon3;Parent=Dca47940.1 |
| scaffold5864 |
Augustus |
exon |
28033 |
28228 |
. |
+ |
. |
ID=Dca47940.1.exon4;Parent=Dca47940.1 |
