Dca47944.1
Annotation
- 3-exons
- f-1
- sp|A5BSC1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_030567#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- sp|Q2QSC3_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g24610#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5866)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47944.1 |
1 |
143 |
176 |
48.86 |
143 |
50 |
6e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BSC1_VITVI |
1541 |
1712 |
2203 |
7.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47944.1 |
69 |
138 |
176 |
17.61 |
70 |
45 |
5e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1265 |
1334 |
1428 |
4.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5866 |
Augustus |
mRNA |
7774 |
9488 |
. |
+ |
. |
ID=Dca47944.1;Parent=Dca47944 |
| scaffold5866 |
Augustus |
exon |
7774 |
8002 |
. |
+ |
. |
ID=Dca47944.1.exon1;Parent=Dca47944.1 |
| scaffold5866 |
Augustus |
exon |
8204 |
8400 |
. |
+ |
. |
ID=Dca47944.1.exon2;Parent=Dca47944.1 |
| scaffold5866 |
Augustus |
exon |
9384 |
9488 |
. |
+ |
. |
ID=Dca47944.1.exon3;Parent=Dca47944.1 |
