Carnation DB

Dca47956.1

Annotation

6-exons
f-1
sp|B9RLM0_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1469440#unknown#0F0P0C
AT4G26190.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:13262473-13266282 REVERSE LENGTH=1057
Repeat List (scaffold587)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47956.1	359	544	545	20.18	186	57	4e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9RLM0_RICCO	347	539	576	33.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47956.1	318	544	545	17.43	227	41	8e-46
Target_name	Start	End	Length	Cov(%)
AT4G26190.1	809	1034	1057	21.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold587	Augus-PASA	mRNA	46097	49007	.	+	.	ID=Dca47956.1;Parent=Dca47956
scaffold587	Augus-PASA	exon	46097	47270	.	+	.	ID=Dca47956.1.exon1;Parent=Dca47956.1
scaffold587	Augus-PASA	exon	47363	47444	.	+	.	ID=Dca47956.1.exon2;Parent=Dca47956.1
scaffold587	Augus-PASA	exon	47556	47622	.	+	.	ID=Dca47956.1.exon3;Parent=Dca47956.1
scaffold587	Augus-PASA	exon	48427	48591	.	+	.	ID=Dca47956.1.exon4;Parent=Dca47956.1
scaffold587	Augus-PASA	exon	48700	48760	.	+	.	ID=Dca47956.1.exon5;Parent=Dca47956.1
scaffold587	Augus-PASA	exon	48919	49007	.	+	.	ID=Dca47956.1.exon6;Parent=Dca47956.1