Dca47990.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5879)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47990.1 |
42 |
328 |
359 |
29.24 |
287 |
33 |
3e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
132 |
453 |
1501 |
21.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47990.1 |
251 |
328 |
359 |
7.24 |
78 |
34 |
3e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
430 |
507 |
1539 |
5.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5879 |
Augustus |
mRNA |
2183 |
3563 |
. |
+ |
. |
ID=Dca47990.1;Parent=Dca47990 |
| scaffold5879 |
Augustus |
exon |
2183 |
2303 |
. |
+ |
. |
ID=Dca47990.1.exon1;Parent=Dca47990.1 |
| scaffold5879 |
Augustus |
exon |
2605 |
3563 |
. |
+ |
. |
ID=Dca47990.1.exon2;Parent=Dca47990.1 |
