Carnation DB

Dca47998.1

Annotation

20-exons
f-1
sp|D7THS3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g09020#GO:0005524;GO:0003677;GO:0004386#3F0P0C
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing protein / helicase domain-containing protein | chr3:4065636-4073992 FORWARD LENGTH=2055
Repeat List (scaffold588)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47998.1	7	1322	1340	73.43	1316	73	0
Target_name	Start	End	Length	Cov(%)
sp\|D7THS3_VITVI	181	1525	1557	86.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47998.1	2	1318	1340	69.62	1317	68	0
Target_name	Start	End	Length	Cov(%)
AT3G57300.2	171	1525	1540	87.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold588	Augustus	mRNA	41852	49488	.	+	.	ID=Dca47998.1;Parent=Dca47998
scaffold588	Augustus	exon	41852	42301	.	+	.	ID=Dca47998.1.exon1;Parent=Dca47998.1
scaffold588	Augustus	exon	42388	42588	.	+	.	ID=Dca47998.1.exon2;Parent=Dca47998.1
scaffold588	Augustus	exon	42678	42788	.	+	.	ID=Dca47998.1.exon3;Parent=Dca47998.1
scaffold588	Augustus	exon	42892	43280	.	+	.	ID=Dca47998.1.exon4;Parent=Dca47998.1
scaffold588	Augustus	exon	43371	43479	.	+	.	ID=Dca47998.1.exon5;Parent=Dca47998.1
scaffold588	Augustus	exon	43604	43684	.	+	.	ID=Dca47998.1.exon6;Parent=Dca47998.1
scaffold588	Augustus	exon	43753	43925	.	+	.	ID=Dca47998.1.exon7;Parent=Dca47998.1
scaffold588	Augustus	exon	44061	44186	.	+	.	ID=Dca47998.1.exon8;Parent=Dca47998.1
scaffold588	Augustus	exon	44520	44669	.	+	.	ID=Dca47998.1.exon9;Parent=Dca47998.1
scaffold588	Augustus	exon	44776	44833	.	+	.	ID=Dca47998.1.exon10;Parent=Dca47998.1
scaffold588	Augustus	exon	45252	45479	.	+	.	ID=Dca47998.1.exon11;Parent=Dca47998.1
scaffold588	Augustus	exon	45597	45743	.	+	.	ID=Dca47998.1.exon12;Parent=Dca47998.1
scaffold588	Augustus	exon	46150	46692	.	+	.	ID=Dca47998.1.exon13;Parent=Dca47998.1
scaffold588	Augustus	exon	46782	47042	.	+	.	ID=Dca47998.1.exon14;Parent=Dca47998.1
scaffold588	Augustus	exon	47131	47238	.	+	.	ID=Dca47998.1.exon15;Parent=Dca47998.1
scaffold588	Augustus	exon	47786	47880	.	+	.	ID=Dca47998.1.exon16;Parent=Dca47998.1
scaffold588	Augustus	exon	48030	48186	.	+	.	ID=Dca47998.1.exon17;Parent=Dca47998.1
scaffold588	Augustus	exon	48305	48502	.	+	.	ID=Dca47998.1.exon18;Parent=Dca47998.1
scaffold588	Augustus	exon	48604	48762	.	+	.	ID=Dca47998.1.exon19;Parent=Dca47998.1
scaffold588	Augustus	exon	49210	49488	.	+	.	ID=Dca47998.1.exon20;Parent=Dca47998.1