Dca47999.1
Annotation
- 4-exons
- f-1
- sp|B9H9I5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_819036#unknown#0F0P0C
- Repeat List (scaffold588)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47999.1 |
12 |
109 |
110 |
46.36 |
98 |
53 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H9I5_POPTR |
10 |
104 |
136 |
69.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47999.1 |
11 |
101 |
110 |
40.9 |
91 |
50 |
3e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0661700-01 |
9 |
98 |
101 |
89.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold588 |
Augus-PASA |
mRNA |
50800 |
51939 |
. |
+ |
. |
ID=Dca47999.1;Parent=Dca47999 |
| scaffold588 |
Augus-PASA |
exon |
50800 |
50880 |
. |
+ |
. |
ID=Dca47999.1.exon1;Parent=Dca47999.1 |
| scaffold588 |
Augus-PASA |
exon |
51459 |
51501 |
. |
+ |
. |
ID=Dca47999.1.exon2;Parent=Dca47999.1 |
| scaffold588 |
Augus-PASA |
exon |
51604 |
51704 |
. |
+ |
. |
ID=Dca47999.1.exon3;Parent=Dca47999.1 |
| scaffold588 |
Augustus |
exon |
51832 |
51939 |
. |
+ |
. |
ID=Dca47999.1.exon4;Parent=Dca47999.1 |
