Carnation DB

Dca48007.1

Annotation

8-exons
f-1
sp|B9H9S8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_560484#GO:0005525#1F0P0C
AT2G41670.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:17374118-17376177 FORWARD LENGTH=386
Repeat List (scaffold588)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48007.1	5	366	380	70.26	362	74	2e-156
Target_name	Start	End	Length	Cov(%)
sp\|B9H9S8_POPTR	7	370	376	96.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48007.1	8	366	380	67.63	359	71	4e-149
Target_name	Start	End	Length	Cov(%)
AT2G41670.1	10	371	386	93.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold588	Augustus	mRNA	115014	117723	.	+	.	ID=Dca48007.1;Parent=Dca48007
scaffold588	Augustus	exon	115014	115175	.	+	.	ID=Dca48007.1.exon1;Parent=Dca48007.1
scaffold588	Augustus	exon	115279	115383	.	+	.	ID=Dca48007.1.exon2;Parent=Dca48007.1
scaffold588	Augustus	exon	115871	115948	.	+	.	ID=Dca48007.1.exon3;Parent=Dca48007.1
scaffold588	Augustus	exon	116179	116320	.	+	.	ID=Dca48007.1.exon4;Parent=Dca48007.1
scaffold588	Augustus	exon	116433	116503	.	+	.	ID=Dca48007.1.exon5;Parent=Dca48007.1
scaffold588	Augustus	exon	116709	116805	.	+	.	ID=Dca48007.1.exon6;Parent=Dca48007.1
scaffold588	Augustus	exon	116902	117113	.	+	.	ID=Dca48007.1.exon7;Parent=Dca48007.1
scaffold588	Augustus	exon	117448	117723	.	+	.	ID=Dca48007.1.exon8;Parent=Dca48007.1