Carnation DB

Dca48008.1

Annotation

5-exons
f-1
sp|B9H9J0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_416538#GO:0005509#1F0P0C
Os12t0137100-01 EF-Hand type domain containing protein.
Repeat List (scaffold588)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48008.1	51	236	236	44.91	186	57	1e-58
Target_name	Start	End	Length	Cov(%)
sp\|B9H9J0_POPTR	76	263	263	71.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48008.1	13	236	236	48.3	224	51	2e-59
Target_name	Start	End	Length	Cov(%)
Os12t0137100-01	71	292	293	75.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold588	Augustus	mRNA	118913	120326	.	-	.	ID=Dca48008.1;Parent=Dca48008
scaffold588	Augustus	exon	118913	119014	.	-	.	ID=Dca48008.1.exon1;Parent=Dca48008.1
scaffold588	Augustus	exon	119281	119299	.	-	.	ID=Dca48008.1.exon2;Parent=Dca48008.1
scaffold588	Augustus	exon	119410	119582	.	-	.	ID=Dca48008.1.exon3;Parent=Dca48008.1
scaffold588	Augustus	exon	119680	119726	.	-	.	ID=Dca48008.1.exon4;Parent=Dca48008.1
scaffold588	Augustus	exon	119957	120326	.	-	.	ID=Dca48008.1.exon5;Parent=Dca48008.1