Carnation DB

Dca48012.1

Annotation

14-exons
f-1
sp|F6GSG3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g10210#unknown#0F0P0C
AT3G48470.1 | Symbols: EMB2423 | embryo defective 2423 | chr3:17951689-17956754 FORWARD LENGTH=1027
Repeat List (scaffold5880)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48012.1	1	919	975	56.51	919	57	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GSG3_VITVI	1	976	985	99.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48012.1	4	970	975	51.38	967	48	0
Target_name	Start	End	Length	Cov(%)
AT3G48470.1	3	1024	1027	99.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5880	Augustus	mRNA	8139	14235	.	+	.	ID=Dca48012.1;Parent=Dca48012
scaffold5880	Augustus	exon	8139	8307	.	+	.	ID=Dca48012.1.exon1;Parent=Dca48012.1
scaffold5880	Augustus	exon	8787	8815	.	+	.	ID=Dca48012.1.exon2;Parent=Dca48012.1
scaffold5880	Augustus	exon	9264	9366	.	+	.	ID=Dca48012.1.exon3;Parent=Dca48012.1
scaffold5880	Augustus	exon	9493	9646	.	+	.	ID=Dca48012.1.exon4;Parent=Dca48012.1
scaffold5880	Augustus	exon	9727	9758	.	+	.	ID=Dca48012.1.exon5;Parent=Dca48012.1
scaffold5880	Augustus	exon	9857	10019	.	+	.	ID=Dca48012.1.exon6;Parent=Dca48012.1
scaffold5880	Augustus	exon	10135	10295	.	+	.	ID=Dca48012.1.exon7;Parent=Dca48012.1
scaffold5880	Augustus	exon	10686	10962	.	+	.	ID=Dca48012.1.exon8;Parent=Dca48012.1
scaffold5880	Augustus	exon	11106	11221	.	+	.	ID=Dca48012.1.exon9;Parent=Dca48012.1
scaffold5880	Augustus	exon	11560	11658	.	+	.	ID=Dca48012.1.exon10;Parent=Dca48012.1
scaffold5880	Augustus	exon	11753	12243	.	+	.	ID=Dca48012.1.exon11;Parent=Dca48012.1
scaffold5880	Augustus	exon	12656	13425	.	+	.	ID=Dca48012.1.exon12;Parent=Dca48012.1
scaffold5880	Augustus	exon	13771	13969	.	+	.	ID=Dca48012.1.exon13;Parent=Dca48012.1
scaffold5880	Augustus	exon	14071	14235	.	+	.	ID=Dca48012.1.exon14;Parent=Dca48012.1