Dca48016.1
Annotation
- 4-exons
- f-1
- sp|C6JRX9_SORBI#Putative uncharacterized protein Sb0013s009070#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb0013s009070#GO:0003676;GO:0015074#1F1P0C
- sp|C7J2X9_ORYSJ#Os05g0235100 protein#Oryza sativa subsp japonica (Rice)#Name=Os05g0235100#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold5881)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48016.1 |
6 |
328 |
337 |
64.98 |
323 |
63 |
2e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C6JRX9_SORBI |
326 |
677 |
1219 |
28.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48016.1 |
6 |
327 |
337 |
38.27 |
322 |
37 |
7e-66
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
146 |
500 |
1262 |
28.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5881 |
Augustus |
mRNA |
31155 |
32512 |
. |
+ |
. |
ID=Dca48016.1;Parent=Dca48016 |
| scaffold5881 |
Augustus |
exon |
31155 |
31166 |
. |
+ |
. |
ID=Dca48016.1.exon1;Parent=Dca48016.1 |
| scaffold5881 |
Augustus |
exon |
31273 |
31512 |
. |
+ |
. |
ID=Dca48016.1.exon2;Parent=Dca48016.1 |
| scaffold5881 |
Augustus |
exon |
31600 |
32332 |
. |
+ |
. |
ID=Dca48016.1.exon3;Parent=Dca48016.1 |
| scaffold5881 |
Augustus |
exon |
32484 |
32512 |
. |
+ |
. |
ID=Dca48016.1.exon4;Parent=Dca48016.1 |
