Dca48056.1
Annotation
- 4-exons
- f-1
- sp|O65362_MESCR#Caffeic acid 3-O-methyltransferase#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#unknown#GO:0008171;GO:0046983#2F0P0C
- Repeat List (scaffold5894)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48056.1 |
17 |
364 |
365 |
55.89 |
348 |
59 |
1e-116
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O65362_MESCR |
2 |
350 |
350 |
99.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48056.1 |
14 |
363 |
365 |
53.15 |
350 |
56 |
2e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G54160.1 |
13 |
362 |
363 |
96.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5894 |
Augustus |
mRNA |
2575 |
4664 |
. |
+ |
. |
ID=Dca48056.1;Parent=Dca48056 |
| scaffold5894 |
Augustus |
exon |
2575 |
2993 |
. |
+ |
. |
ID=Dca48056.1.exon1;Parent=Dca48056.1 |
| scaffold5894 |
Augustus |
exon |
3188 |
3498 |
. |
+ |
. |
ID=Dca48056.1.exon2;Parent=Dca48056.1 |
| scaffold5894 |
Augustus |
exon |
4006 |
4070 |
. |
+ |
. |
ID=Dca48056.1.exon3;Parent=Dca48056.1 |
| scaffold5894 |
Augus-PASA |
exon |
4362 |
4664 |
. |
+ |
. |
ID=Dca48056.1.exon4;Parent=Dca48056.1 |
