Carnation DB

Dca48071.1

Annotation

6-exons
f-1
sp|F6I4I6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0060g00260#unknown#0F0P0C
Os01t0286100-01 Helix-loop-helix DNA-binding domain containing protein.
Repeat List (scaffold5898)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48071.1	1	611	632	47.15	611	45	4e-114
Target_name	Start	End	Length	Cov(%)
sp\|F6I4I6_VITVI	1	657	709	92.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48071.1	242	606	632	23.1	365	40	5e-48
Target_name	Start	End	Length	Cov(%)
Os01t0286100-01	308	654	732	47.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5898	Augustus	mRNA	16525	19112	.	+	.	ID=Dca48071.1;Parent=Dca48071
scaffold5898	Augustus	exon	16525	16616	.	+	.	ID=Dca48071.1.exon1;Parent=Dca48071.1
scaffold5898	Augustus	exon	16870	17977	.	+	.	ID=Dca48071.1.exon2;Parent=Dca48071.1
scaffold5898	Augustus	exon	18077	18175	.	+	.	ID=Dca48071.1.exon3;Parent=Dca48071.1
scaffold5898	Augustus	exon	18266	18331	.	+	.	ID=Dca48071.1.exon4;Parent=Dca48071.1
scaffold5898	Augustus	exon	18495	18560	.	+	.	ID=Dca48071.1.exon5;Parent=Dca48071.1
scaffold5898	Augustus	exon	18648	19112	.	+	.	ID=Dca48071.1.exon6;Parent=Dca48071.1