Carnation DB

Dca48088.1

Annotation

6-exons
f-1
sp|F6HLW1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g04360#GO:0005634;GO:0003676#1F0P1C
AT4G05420.1 | Symbols: DDB1A | damaged DNA binding protein 1A | chr4:2746288-2752663 FORWARD LENGTH=1088
Repeat List (scaffold59)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48088.1	11	534	539	56.21	524	51	8e-151
Target_name	Start	End	Length	Cov(%)
sp\|F6HLW1_VITVI	499	1089	1089	54.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48088.1	11	534	539	53.98	524	49	5e-148
Target_name	Start	End	Length	Cov(%)
AT4G05420.1	499	1088	1088	54.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold59	Augustus	mRNA	145209	147472	.	-	.	ID=Dca48088.1;Parent=Dca48088
scaffold59	Augustus	exon	145209	145674	.	-	.	ID=Dca48088.1.exon1;Parent=Dca48088.1
scaffold59	Augustus	exon	145776	145835	.	-	.	ID=Dca48088.1.exon2;Parent=Dca48088.1
scaffold59	Augustus	exon	145941	146110	.	-	.	ID=Dca48088.1.exon3;Parent=Dca48088.1
scaffold59	Augustus	exon	146241	146568	.	-	.	ID=Dca48088.1.exon4;Parent=Dca48088.1
scaffold59	Augustus	exon	146668	146939	.	-	.	ID=Dca48088.1.exon5;Parent=Dca48088.1
scaffold59	Augustus	exon	147149	147472	.	-	.	ID=Dca48088.1.exon6;Parent=Dca48088.1