Carnation DB

Dca48104.1

Annotation

7-exons
f-1
sp|B9SZG9_RICCO#Auxin-induced protein 5NG4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0393020#GO:0016020#0F0P1C
Repeat List (scaffold59)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48104.1	8	357	361	40.16	350	42	8e-73
Target_name	Start	End	Length	Cov(%)
sp\|B9SZG9_RICCO	5	347	348	98.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48104.1	13	360	361	42.1	348	43	2e-62
Target_name	Start	End	Length	Cov(%)
AT3G28050.1	16	364	367	95.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold59	Augus-PASA	mRNA	333150	335928	.	+	.	ID=Dca48104.1;Parent=Dca48104
scaffold59	Augus-PASA	exon	333150	333331	.	+	.	ID=Dca48104.1.exon1;Parent=Dca48104.1
scaffold59	Augus-PASA	exon	333539	333604	.	+	.	ID=Dca48104.1.exon2;Parent=Dca48104.1
scaffold59	Augus-PASA	exon	334100	334213	.	+	.	ID=Dca48104.1.exon3;Parent=Dca48104.1
scaffold59	Augus-PASA	exon	334528	334774	.	+	.	ID=Dca48104.1.exon4;Parent=Dca48104.1
scaffold59	Augus-PASA	exon	335247	335405	.	+	.	ID=Dca48104.1.exon5;Parent=Dca48104.1
scaffold59	Augus-PASA	exon	335492	335640	.	+	.	ID=Dca48104.1.exon6;Parent=Dca48104.1
scaffold59	Augus-PASA	exon	335760	335928	.	+	.	ID=Dca48104.1.exon7;Parent=Dca48104.1