Carnation DB

Dca48105.1

Annotation

7-exons
f-1
sp|B9HJR3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_766289#GO:0016020#0F0P1C
sp|B9SZH5_RICCO#Auxin-induced protein 5NG4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0393280#GO:0016020#0F0P1C
Repeat List (scaffold59)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48105.1	5	349	356	58.98	345	60	8e-113
Target_name	Start	End	Length	Cov(%)
sp\|B9HJR3_POPTR	6	353	355	98.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48105.1	2	344	356	42.97	343	43	3e-71
Target_name	Start	End	Length	Cov(%)
AT3G28050.1	7	358	367	95.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold59	Augustus	mRNA	337183	339588	.	+	.	ID=Dca48105.1;Parent=Dca48105
scaffold59	Augustus	exon	337183	337361	.	+	.	ID=Dca48105.1.exon1;Parent=Dca48105.1
scaffold59	Augustus	exon	337541	337606	.	+	.	ID=Dca48105.1.exon2;Parent=Dca48105.1
scaffold59	Augustus	exon	337920	338033	.	+	.	ID=Dca48105.1.exon3;Parent=Dca48105.1
scaffold59	Augustus	exon	338329	338569	.	+	.	ID=Dca48105.1.exon4;Parent=Dca48105.1
scaffold59	Augustus	exon	338755	338913	.	+	.	ID=Dca48105.1.exon5;Parent=Dca48105.1
scaffold59	Augustus	exon	339129	339280	.	+	.	ID=Dca48105.1.exon6;Parent=Dca48105.1
scaffold59	Augustus	exon	339429	339588	.	+	.	ID=Dca48105.1.exon7;Parent=Dca48105.1