Carnation DB

Dca48120.1

Annotation

5-exons
f-1
sp|B9S5H1_RICCO#WD-repeat protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0976080#unknown#0F0P0C
Repeat List (scaffold5900)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48120.1	4	435	531	56.12	432	69	8e-179
Target_name	Start	End	Length	Cov(%)
sp\|B9S5H1_RICCO	3	427	482	88.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48120.1	9	484	531	54.42	476	60	2e-157
Target_name	Start	End	Length	Cov(%)
AT4G35140.1	14	495	496	97.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5900	Augustus	mRNA	11955	15732	.	-	.	ID=Dca48120.1;Parent=Dca48120
scaffold5900	Augustus	exon	11955	12296	.	-	.	ID=Dca48120.1.exon1;Parent=Dca48120.1
scaffold5900	Augustus	exon	13699	14442	.	-	.	ID=Dca48120.1.exon2;Parent=Dca48120.1
scaffold5900	Augustus	exon	14841	14984	.	-	.	ID=Dca48120.1.exon3;Parent=Dca48120.1
scaffold5900	Augustus	exon	15071	15322	.	-	.	ID=Dca48120.1.exon4;Parent=Dca48120.1
scaffold5900	Augustus	exon	15619	15732	.	-	.	ID=Dca48120.1.exon5;Parent=Dca48120.1