Dca48170.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5914)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48170.1 |
57 |
689 |
799 |
37.17 |
633 |
43 |
2e-134
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
33 |
727 |
1717 |
40.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48170.1 |
464 |
556 |
799 |
4 |
93 |
35 |
3e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5914 |
Augustus |
mRNA |
8245 |
10885 |
. |
+ |
. |
ID=Dca48170.1;Parent=Dca48170 |
| scaffold5914 |
Augustus |
exon |
8245 |
8409 |
. |
+ |
. |
ID=Dca48170.1.exon1;Parent=Dca48170.1 |
| scaffold5914 |
Augustus |
exon |
8525 |
9157 |
. |
+ |
. |
ID=Dca48170.1.exon2;Parent=Dca48170.1 |
| scaffold5914 |
Augustus |
exon |
9284 |
10885 |
. |
+ |
. |
ID=Dca48170.1.exon3;Parent=Dca48170.1 |
