Carnation DB

Dca48212.1

Annotation

6-exons
f-1
sp|G5DW46_SILLA#Peptidyl-prolyl isomerase domain and WD repeat-containing protein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0003755;GO:0006457#1F1P0C
Repeat List (scaffold5920)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48212.1	1	214	275	68.36	214	88	2e-107
Target_name	Start	End	Length	Cov(%)
sp\|G5DW46_SILLA	15	229	499	43.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48212.1	1	214	275	60.36	214	78	6e-99
Target_name	Start	End	Length	Cov(%)
AT3G44600.1	147	361	631	34.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5920	Augustus	mRNA	10918	14904	.	-	.	ID=Dca48212.1;Parent=Dca48212
scaffold5920	Augustus	exon	10918	11103	.	-	.	ID=Dca48212.1.exon1;Parent=Dca48212.1
scaffold5920	Augustus	exon	13304	13480	.	-	.	ID=Dca48212.1.exon2;Parent=Dca48212.1
scaffold5920	Augustus	exon	13589	13693	.	-	.	ID=Dca48212.1.exon3;Parent=Dca48212.1
scaffold5920	Augustus	exon	13887	13962	.	-	.	ID=Dca48212.1.exon4;Parent=Dca48212.1
scaffold5920	Augustus	exon	14497	14618	.	-	.	ID=Dca48212.1.exon5;Parent=Dca48212.1
scaffold5920	Augustus	exon	14743	14904	.	-	.	ID=Dca48212.1.exon6;Parent=Dca48212.1