Carnation DB

Dca48289.1

Annotation

6-exons
f-1
sp|B9S4U1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0992710#GO:0005524;GO:0016301#2F0P0C
AT1G06750.2 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:2073882-2076350 FORWARD LENGTH=526
Repeat List (scaffold594)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48289.1	36	413	413	64.4	378	71	5e-155
Target_name	Start	End	Length	Cov(%)
sp\|B9S4U1_RICCO	10	382	509	73.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48289.1	31	413	413	64.4	383	70	3e-146
Target_name	Start	End	Length	Cov(%)
AT1G06750.2	14	390	526	71.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold594	Augustus	mRNA	81365	83264	.	-	.	ID=Dca48289.1;Parent=Dca48289
scaffold594	Augustus	exon	81365	81691	.	-	.	ID=Dca48289.1.exon1;Parent=Dca48289.1
scaffold594	Augustus	exon	81792	81918	.	-	.	ID=Dca48289.1.exon2;Parent=Dca48289.1
scaffold594	Augustus	exon	82149	82382	.	-	.	ID=Dca48289.1.exon3;Parent=Dca48289.1
scaffold594	Augustus	exon	82490	82554	.	-	.	ID=Dca48289.1.exon4;Parent=Dca48289.1
scaffold594	Augustus	exon	82675	82898	.	-	.	ID=Dca48289.1.exon5;Parent=Dca48289.1
scaffold594	Augustus	exon	83000	83264	.	-	.	ID=Dca48289.1.exon6;Parent=Dca48289.1