Dca48306.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5942)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48306.1 |
75 |
729 |
838 |
36.63 |
655 |
42 |
2e-140
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
728 |
1717 |
41.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48306.1 |
504 |
595 |
838 |
3.81 |
92 |
35 |
6e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5942 |
Augustus |
mRNA |
1440 |
4197 |
. |
- |
. |
ID=Dca48306.1;Parent=Dca48306 |
| scaffold5942 |
Augustus |
exon |
1440 |
2918 |
. |
- |
. |
ID=Dca48306.1.exon1;Parent=Dca48306.1 |
| scaffold5942 |
Augustus |
exon |
3160 |
4197 |
. |
- |
. |
ID=Dca48306.1.exon2;Parent=Dca48306.1 |
