Dca48307.1
Annotation
- 3-exons
- f-1
- sp|A5BAQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004685#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold5942)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48307.1 |
21 |
452 |
484 |
43.59 |
432 |
46 |
3e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BAQ4_VITVI |
198 |
653 |
1196 |
38.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48307.1 |
194 |
466 |
484 |
20.86 |
273 |
36 |
1e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
494 |
776 |
1428 |
19.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5942 |
Augustus |
mRNA |
5342 |
7170 |
. |
- |
. |
ID=Dca48307.1;Parent=Dca48307 |
| scaffold5942 |
Augustus |
exon |
5342 |
5457 |
. |
- |
. |
ID=Dca48307.1.exon1;Parent=Dca48307.1 |
| scaffold5942 |
Augustus |
exon |
5660 |
6514 |
. |
- |
. |
ID=Dca48307.1.exon2;Parent=Dca48307.1 |
| scaffold5942 |
Augustus |
exon |
6687 |
7170 |
. |
- |
. |
ID=Dca48307.1.exon3;Parent=Dca48307.1 |
