Dca48322.1
Annotation
- 2-exons
- f-1
- sp|B9NER8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_595820#unknown#0F0P0C
- Os06t0140200-01 Leucine-rich repeat, plant specific containing protein.
- Repeat List (scaffold595)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48322.1 |
106 |
602 |
606 |
28.87 |
497 |
33 |
4e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9NER8_POPTR |
351 |
874 |
963 |
54.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48322.1 |
113 |
601 |
606 |
27.06 |
489 |
32 |
4e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0140200-01 |
226 |
711 |
981 |
49.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold595 |
Augustus |
mRNA |
60273 |
62893 |
. |
+ |
. |
ID=Dca48322.1;Parent=Dca48322 |
| scaffold595 |
Augustus |
exon |
60273 |
61524 |
. |
+ |
. |
ID=Dca48322.1.exon1;Parent=Dca48322.1 |
| scaffold595 |
Augustus |
exon |
62325 |
62893 |
. |
+ |
. |
ID=Dca48322.1.exon2;Parent=Dca48322.1 |
