Dca48325.1
Annotation
- 2-exons
- f-1
- sp|B9NER8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_595820#unknown#0F0P0C
- Os06t0140200-01 Leucine-rich repeat, plant specific containing protein.
- Repeat List (scaffold595)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48325.1 |
338 |
1059 |
1063 |
23.04 |
722 |
31 |
1e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9NER8_POPTR |
111 |
878 |
963 |
79.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48325.1 |
41 |
948 |
1063 |
32.64 |
908 |
37 |
1e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0140200-01 |
36 |
953 |
981 |
93.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold595 |
Augustus |
mRNA |
86229 |
90682 |
. |
+ |
. |
ID=Dca48325.1;Parent=Dca48325 |
| scaffold595 |
Augustus |
exon |
86229 |
88956 |
. |
+ |
. |
ID=Dca48325.1.exon1;Parent=Dca48325.1 |
| scaffold595 |
Augustus |
exon |
90219 |
90682 |
. |
+ |
. |
ID=Dca48325.1.exon2;Parent=Dca48325.1 |
