Carnation DB

Dca48332.1

Annotation

6-exons
f-1
sp|B9N4X8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_581509#GO:0005634#0F0P1C
AT4G34412.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | chr4:16453099-16454515 REVERSE LENGTH=172
Repeat List (scaffold5950)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48332.1	1	158	158	70.25	158	71	6e-59
Target_name	Start	End	Length	Cov(%)
sp\|B9N4X8_POPTR	30	172	172	83.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48332.1	1	158	158	63.29	158	64	4e-51
Target_name	Start	End	Length	Cov(%)
AT4G34412.1	30	172	172	83.13

seqname	source	feature	start	end	score	strand	frame	group
scaffold5950	Augustus	mRNA	17347	18899	.	-	.	ID=Dca48332.1;Parent=Dca48332
scaffold5950	Augustus	exon	17347	17433	.	-	.	ID=Dca48332.1.exon1;Parent=Dca48332.1
scaffold5950	Augustus	exon	17527	17613	.	-	.	ID=Dca48332.1.exon2;Parent=Dca48332.1
scaffold5950	Augustus	exon	17695	17778	.	-	.	ID=Dca48332.1.exon3;Parent=Dca48332.1
scaffold5950	Augustus	exon	17909	18031	.	-	.	ID=Dca48332.1.exon4;Parent=Dca48332.1
scaffold5950	Augustus	exon	18675	18719	.	-	.	ID=Dca48332.1.exon5;Parent=Dca48332.1
scaffold5950	Augustus	exon	18849	18899	.	-	.	ID=Dca48332.1.exon6;Parent=Dca48332.1