Carnation DB

Dca4836.1

Annotation

12-exons
f-1
sp|F6HWP9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0244g00060#GO:0005634;GO:0004721#1F0P1C
AT2G33540.1 | Symbols: CPL3, ATCPL3 | C-terminal domain phosphatase-like 3 | chr2:14204081-14208797 REVERSE LENGTH=1241
Repeat List (scaffold1183)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4836.1	52	1243	1243	50.04	1192	50	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HWP9_VITVI	41	1253	1253	96.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4836.1	56	1243	1243	43.28	1188	44	0
Target_name	Start	End	Length	Cov(%)
AT2G33540.1	80	1241	1241	93.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1183	Augustus	mRNA	1116	6153	.	+	.	ID=Dca4836.1;Parent=Dca4836
scaffold1183	Augustus	exon	1116	1693	.	+	.	ID=Dca4836.1.exon1;Parent=Dca4836.1
scaffold1183	Augustus	exon	1799	1931	.	+	.	ID=Dca4836.1.exon2;Parent=Dca4836.1
scaffold1183	Augustus	exon	2118	2173	.	+	.	ID=Dca4836.1.exon3;Parent=Dca4836.1
scaffold1183	Augustus	exon	2250	2310	.	+	.	ID=Dca4836.1.exon4;Parent=Dca4836.1
scaffold1183	Augustus	exon	2401	3801	.	+	.	ID=Dca4836.1.exon5;Parent=Dca4836.1
scaffold1183	Augustus	exon	4039	4644	.	+	.	ID=Dca4836.1.exon6;Parent=Dca4836.1
scaffold1183	Augustus	exon	4738	4884	.	+	.	ID=Dca4836.1.exon7;Parent=Dca4836.1
scaffold1183	Augustus	exon	4986	5254	.	+	.	ID=Dca4836.1.exon8;Parent=Dca4836.1
scaffold1183	Augustus	exon	5366	5477	.	+	.	ID=Dca4836.1.exon9;Parent=Dca4836.1
scaffold1183	Augustus	exon	5564	5821	.	+	.	ID=Dca4836.1.exon10;Parent=Dca4836.1
scaffold1183	Augustus	exon	5958	6004	.	+	.	ID=Dca4836.1.exon11;Parent=Dca4836.1
scaffold1183	Augustus	exon	6090	6153	.	+	.	ID=Dca4836.1.exon12;Parent=Dca4836.1