Dca48372.1
Annotation
- 3-exons
- f-1
- sp|A5B781_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_000585#unknown#0F0P0C
- sp|Q9LVQ2_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5960)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48372.1 |
47 |
320 |
477 |
19.07 |
274 |
34 |
1e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B781_VITVI |
20 |
283 |
334 |
79.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48372.1 |
30 |
252 |
477 |
14.46 |
223 |
30 |
2e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
1 |
225 |
237 |
94.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5960 |
Augustus |
mRNA |
22957 |
24927 |
. |
+ |
. |
ID=Dca48372.1;Parent=Dca48372 |
| scaffold5960 |
Augustus |
exon |
22957 |
23037 |
. |
+ |
. |
ID=Dca48372.1.exon1;Parent=Dca48372.1 |
| scaffold5960 |
Augustus |
exon |
23297 |
24442 |
. |
+ |
. |
ID=Dca48372.1.exon2;Parent=Dca48372.1 |
| scaffold5960 |
Augustus |
exon |
24724 |
24927 |
. |
+ |
. |
ID=Dca48372.1.exon3;Parent=Dca48372.1 |
