Dca48394.1
Annotation
- 4-exons
- f-1
- sp|D7L7A3_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_479237#GO:0005634;GO:0046983;GO:0043565;GO:0003700#3F0P1C
- AT3G17609.2 | Symbols: HYH | HY5-homolog | chr3:6023971-6024585 FORWARD LENGTH=149
- Repeat List (scaffold597)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48394.1 |
21 |
131 |
146 |
50.68 |
111 |
62 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L7A3_ARALL |
22 |
142 |
149 |
81.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48394.1 |
21 |
131 |
146 |
50.68 |
111 |
62 |
2e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G17609.2 |
22 |
142 |
149 |
81.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold597 |
Augustus |
mRNA |
49159 |
52060 |
. |
+ |
. |
ID=Dca48394.1;Parent=Dca48394 |
| scaffold597 |
Augustus |
exon |
49159 |
49219 |
. |
+ |
. |
ID=Dca48394.1.exon1;Parent=Dca48394.1 |
| scaffold597 |
Augustus |
exon |
49582 |
49738 |
. |
+ |
. |
ID=Dca48394.1.exon2;Parent=Dca48394.1 |
| scaffold597 |
Augustus |
exon |
50987 |
51143 |
. |
+ |
. |
ID=Dca48394.1.exon3;Parent=Dca48394.1 |
| scaffold597 |
Augustus |
exon |
51995 |
52060 |
. |
+ |
. |
ID=Dca48394.1.exon4;Parent=Dca48394.1 |
