Dca48408.1
Annotation
- 2-exons
- f-1
- sp|A5CBQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013115#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold597)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48408.1 |
54 |
182 |
182 |
50 |
129 |
71 |
4e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CBQ4_VITVI |
1050 |
1178 |
1178 |
10.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48408.1 |
27 |
172 |
182 |
34.61 |
146 |
40 |
1e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1232 |
1389 |
1401 |
11.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold597 |
Augustus |
mRNA |
207256 |
209239 |
. |
+ |
. |
ID=Dca48408.1;Parent=Dca48408 |
| scaffold597 |
Augustus |
exon |
207256 |
207403 |
. |
+ |
. |
ID=Dca48408.1.exon1;Parent=Dca48408.1 |
| scaffold597 |
Augustus |
exon |
208839 |
209239 |
. |
+ |
. |
ID=Dca48408.1.exon2;Parent=Dca48408.1 |
