Carnation DB

Dca4842.1

Annotation

7-exons
f-1
sp|F6I6Y1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0122g00190#unknown#0F0P0C
Os02t0187500-01 Uncharacterised protein family UPF0047 domain containing protein.
Repeat List (scaffold1183)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4842.1	1	179	179	73.18	179	71	8e-73
Target_name	Start	End	Length	Cov(%)
sp\|F6I6Y1_VITVI	51	236	236	78.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4842.1	1	179	179	70.39	179	69	2e-70
Target_name	Start	End	Length	Cov(%)
AT1G21065.1	40	217	217	82.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1183	Augus-PASA	mRNA	53397	61184	.	-	.	ID=Dca4842.1;Parent=Dca4842
scaffold1183	Augus-PASA	exon	53397	53468	.	-	.	ID=Dca4842.1.exon1;Parent=Dca4842.1
scaffold1183	Augus-PASA	exon	54015	54057	.	-	.	ID=Dca4842.1.exon2;Parent=Dca4842.1
scaffold1183	Augus-PASA	exon	54152	54206	.	-	.	ID=Dca4842.1.exon3;Parent=Dca4842.1
scaffold1183	Augus-PASA	exon	58006	58039	.	-	.	ID=Dca4842.1.exon4;Parent=Dca4842.1
scaffold1183	Augus-PASA	exon	58130	58224	.	-	.	ID=Dca4842.1.exon5;Parent=Dca4842.1
scaffold1183	Augus-PASA	exon	58333	58393	.	-	.	ID=Dca4842.1.exon6;Parent=Dca4842.1
scaffold1183	Augus-PASA	exon	61005	61184	.	-	.	ID=Dca4842.1.exon7;Parent=Dca4842.1