Carnation DB

Dca48440.1

Annotation

8-exons
f-1
sp|D7U0G3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g04120#unknown#0F0P0C
AT4G29100.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:14341140-14344575 FORWARD LENGTH=407
Repeat List (scaffold598)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48440.1	1	189	189	71.42	189	71	3e-69
Target_name	Start	End	Length	Cov(%)
sp\|D7U0G3_VITVI	148	329	329	55.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48440.1	1	189	189	62.96	189	60	2e-56
Target_name	Start	End	Length	Cov(%)
AT4G29100.1	211	406	407	48.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold598	Augustus	mRNA	28068	35113	.	+	.	ID=Dca48440.1;Parent=Dca48440
scaffold598	Augustus	exon	28068	28142	.	+	.	ID=Dca48440.1.exon1;Parent=Dca48440.1
scaffold598	Augus-PASA	exon	28237	28308	.	+	.	ID=Dca48440.1.exon2;Parent=Dca48440.1
scaffold598	Augus-PASA	exon	30339	30404	.	+	.	ID=Dca48440.1.exon3;Parent=Dca48440.1
scaffold598	Augustus	exon	31410	31475	.	+	.	ID=Dca48440.1.exon4;Parent=Dca48440.1
scaffold598	Augustus	exon	31625	31693	.	+	.	ID=Dca48440.1.exon5;Parent=Dca48440.1
scaffold598	Augustus	exon	32327	32371	.	+	.	ID=Dca48440.1.exon6;Parent=Dca48440.1
scaffold598	Augustus	exon	32678	32725	.	+	.	ID=Dca48440.1.exon7;Parent=Dca48440.1
scaffold598	Augustus	exon	34985	35113	.	+	.	ID=Dca48440.1.exon8;Parent=Dca48440.1