Carnation DB

Dca48444.1

Annotation

13-exons
f-1
sp|B9GG48_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_705740#GO:0016021;GO:0022891#1F0P1C
AT1G79820.1 | Symbols: SGB1 | Major facilitator superfamily protein | chr1:30022581-30026771 REVERSE LENGTH=495
Repeat List (scaffold598)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48444.1	1	485	486	71.39	485	71	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GG48_POPTR	1	487	489	99.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48444.1	1	484	486	66.66	484	67	0
Target_name	Start	End	Length	Cov(%)
AT1G79820.1	11	491	495	97.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold598	Augustus	mRNA	68729	75296	.	-	.	ID=Dca48444.1;Parent=Dca48444
scaffold598	Augustus	exon	68729	68908	.	-	.	ID=Dca48444.1.exon1;Parent=Dca48444.1
scaffold598	Augustus	exon	69280	69394	.	-	.	ID=Dca48444.1.exon2;Parent=Dca48444.1
scaffold598	Augustus	exon	70104	70192	.	-	.	ID=Dca48444.1.exon3;Parent=Dca48444.1
scaffold598	Augustus	exon	70636	70709	.	-	.	ID=Dca48444.1.exon4;Parent=Dca48444.1
scaffold598	Augustus	exon	70954	71097	.	-	.	ID=Dca48444.1.exon5;Parent=Dca48444.1
scaffold598	Augustus	exon	71180	71333	.	-	.	ID=Dca48444.1.exon6;Parent=Dca48444.1
scaffold598	Augustus	exon	71510	71603	.	-	.	ID=Dca48444.1.exon7;Parent=Dca48444.1
scaffold598	Augustus	exon	71703	71815	.	-	.	ID=Dca48444.1.exon8;Parent=Dca48444.1
scaffold598	Augustus	exon	71890	71989	.	-	.	ID=Dca48444.1.exon9;Parent=Dca48444.1
scaffold598	Augustus	exon	72658	72790	.	-	.	ID=Dca48444.1.exon10;Parent=Dca48444.1
scaffold598	Augustus	exon	72991	73058	.	-	.	ID=Dca48444.1.exon11;Parent=Dca48444.1
scaffold598	Augustus	exon	73927	74035	.	-	.	ID=Dca48444.1.exon12;Parent=Dca48444.1
scaffold598	Augustus	exon	75209	75296	.	-	.	ID=Dca48444.1.exon13;Parent=Dca48444.1