Carnation DB

Dca48449.1

Annotation

7-exons
f-1
sp|B9RQK7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1493800#GO:0005089#1F0P0C
AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO guanyl-nucleotide exchange factor 12 | chr1:30042172-30044092 REVERSE LENGTH=515
Repeat List (scaffold598)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48449.1	1	549	549	67.75	549	66	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RQK7_RICCO	1	554	554	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48449.1	1	549	549	61.02	549	59	8e-173
Target_name	Start	End	Length	Cov(%)
AT1G79860.1	1	515	515	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold598	Augustus	mRNA	95388	97757	.	-	.	ID=Dca48449.1;Parent=Dca48449
scaffold598	Augustus	exon	95388	95813	.	-	.	ID=Dca48449.1.exon1;Parent=Dca48449.1
scaffold598	Augustus	exon	95898	96218	.	-	.	ID=Dca48449.1.exon2;Parent=Dca48449.1
scaffold598	Augustus	exon	96315	96581	.	-	.	ID=Dca48449.1.exon3;Parent=Dca48449.1
scaffold598	Augustus	exon	96696	96770	.	-	.	ID=Dca48449.1.exon4;Parent=Dca48449.1
scaffold598	Augustus	exon	96868	97022	.	-	.	ID=Dca48449.1.exon5;Parent=Dca48449.1
scaffold598	Augustus	exon	97123	97239	.	-	.	ID=Dca48449.1.exon6;Parent=Dca48449.1
scaffold598	Augustus	exon	97469	97757	.	-	.	ID=Dca48449.1.exon7;Parent=Dca48449.1