Dca48497.1
Annotation
- 3-exons
- f-1
- sp|A9PDT4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_831131#unknown#0F0P0C
- Repeat List (scaffold5993)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48497.1 |
14 |
173 |
173 |
54.33 |
160 |
59 |
8e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PDT4_POPTR |
20 |
178 |
178 |
89.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48497.1 |
18 |
173 |
173 |
49.71 |
156 |
53 |
7e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G16110.1 |
85 |
244 |
244 |
65.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5993 |
Augustus |
mRNA |
10916 |
12121 |
. |
- |
. |
ID=Dca48497.1;Parent=Dca48497 |
| scaffold5993 |
Augustus |
exon |
10916 |
11224 |
. |
- |
. |
ID=Dca48497.1.exon1;Parent=Dca48497.1 |
| scaffold5993 |
Augustus |
exon |
11740 |
11806 |
. |
- |
. |
ID=Dca48497.1.exon2;Parent=Dca48497.1 |
| scaffold5993 |
Augustus |
exon |
11976 |
12121 |
. |
- |
. |
ID=Dca48497.1.exon3;Parent=Dca48497.1 |
