Dca48498.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5994)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48498.1 |
3 |
401 |
403 |
62.03 |
399 |
63 |
8e-144
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
490 |
838 |
1501 |
23.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48498.1 |
4 |
403 |
403 |
37.96 |
400 |
38 |
2e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
179 |
529 |
707 |
49.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5994 |
Augustus |
mRNA |
9760 |
11224 |
. |
+ |
. |
ID=Dca48498.1;Parent=Dca48498 |
| scaffold5994 |
Augustus |
exon |
9760 |
10365 |
. |
+ |
. |
ID=Dca48498.1.exon1;Parent=Dca48498.1 |
| scaffold5994 |
Augustus |
exon |
10619 |
11224 |
. |
+ |
. |
ID=Dca48498.1.exon2;Parent=Dca48498.1 |
