Dca48508.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5996)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48508.1 |
35 |
256 |
299 |
29.43 |
222 |
35 |
7e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
32 |
285 |
1501 |
16.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48508.1 |
39 |
190 |
299 |
16.38 |
152 |
33 |
1e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
229 |
296 |
50.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5996 |
Augustus |
mRNA |
14474 |
15457 |
. |
+ |
. |
ID=Dca48508.1;Parent=Dca48508 |
| scaffold5996 |
Augustus |
exon |
14474 |
15004 |
. |
+ |
. |
ID=Dca48508.1.exon1;Parent=Dca48508.1 |
| scaffold5996 |
Augustus |
exon |
15089 |
15457 |
. |
+ |
. |
ID=Dca48508.1.exon2;Parent=Dca48508.1 |
