Dca48511.1
Annotation
- 3-exons
- f-1
- sp|A5BE46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_025855#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold5997)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48511.1 |
1 |
944 |
1031 |
69.35 |
944 |
72 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BE46_VITVI |
5 |
979 |
1356 |
71.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48511.1 |
784 |
930 |
1031 |
6.4 |
147 |
45 |
6e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
902 |
1046 |
1428 |
10.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5997 |
Augustus |
mRNA |
14222 |
17599 |
. |
+ |
. |
ID=Dca48511.1;Parent=Dca48511 |
| scaffold5997 |
Augustus |
exon |
14222 |
16288 |
. |
+ |
. |
ID=Dca48511.1.exon1;Parent=Dca48511.1 |
| scaffold5997 |
Augustus |
exon |
16420 |
17163 |
. |
+ |
. |
ID=Dca48511.1.exon2;Parent=Dca48511.1 |
| scaffold5997 |
Augustus |
exon |
17315 |
17599 |
. |
+ |
. |
ID=Dca48511.1.exon3;Parent=Dca48511.1 |
