Dca48513.1
Annotation
- 4-exons
- f-1
- sp|Q9LVQ1_ARATH#Non-LTR retroelement reverse transcriptase-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold5998)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48513.1 |
417 |
609 |
609 |
15.76 |
193 |
50 |
4e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LVQ1_ARATH |
319 |
511 |
1072 |
18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48513.1 |
413 |
609 |
609 |
11 |
197 |
34 |
8e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
356 |
553 |
857 |
23.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5998 |
Augustus |
mRNA |
11347 |
14759 |
. |
+ |
. |
ID=Dca48513.1;Parent=Dca48513 |
| scaffold5998 |
Augustus |
exon |
11347 |
12060 |
. |
+ |
. |
ID=Dca48513.1.exon1;Parent=Dca48513.1 |
| scaffold5998 |
Augustus |
exon |
12175 |
12461 |
. |
+ |
. |
ID=Dca48513.1.exon2;Parent=Dca48513.1 |
| scaffold5998 |
Augustus |
exon |
13713 |
13881 |
. |
+ |
. |
ID=Dca48513.1.exon3;Parent=Dca48513.1 |
| scaffold5998 |
Augustus |
exon |
14100 |
14759 |
. |
+ |
. |
ID=Dca48513.1.exon4;Parent=Dca48513.1 |
