Dca48523.1
Annotation
- 4-exons
- f-1
- sp|B9ID04_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_575740#GO:0005506;GO:0031418;GO:0016706#3F0P0C
- AT5G51880.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:21089395-21090775 FORWARD LENGTH=250
- Repeat List (scaffold6)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48523.1 |
70 |
263 |
266 |
56.01 |
194 |
77 |
9e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9ID04_POPTR |
45 |
240 |
240 |
81.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48523.1 |
70 |
263 |
266 |
51.87 |
194 |
70 |
2e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G51880.1 |
53 |
250 |
250 |
79.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6 |
Augustus |
mRNA |
60597 |
64316 |
. |
+ |
. |
ID=Dca48523.1;Parent=Dca48523 |
| scaffold6 |
Augustus |
exon |
60597 |
60809 |
. |
+ |
. |
ID=Dca48523.1.exon1;Parent=Dca48523.1 |
| scaffold6 |
Augustus |
exon |
63325 |
63572 |
. |
+ |
. |
ID=Dca48523.1.exon2;Parent=Dca48523.1 |
| scaffold6 |
Augus-PASA |
exon |
63888 |
64095 |
. |
+ |
. |
ID=Dca48523.1.exon3;Parent=Dca48523.1 |
| scaffold6 |
Augus-PASA |
exon |
64185 |
64316 |
. |
+ |
. |
ID=Dca48523.1.exon4;Parent=Dca48523.1 |
