Carnation DB

Dca48532.1

Annotation

8-exons
f-1
sp|B9ID05_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_835294#GO:0008839;GO:0070402;GO:0009089#2F1P0C
AT5G52100.1 | Symbols: crr1 | Dihydrodipicolinate reductase, bacterial/plant | chr5:21170203-21172107 FORWARD LENGTH=298
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48532.1	4	237	237	73.41	234	70	9e-94
Target_name	Start	End	Length	Cov(%)
sp\|B9ID05_POPTR	21	262	300	80.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48532.1	1	237	237	70.04	237	66	7e-89
Target_name	Start	End	Length	Cov(%)
AT5G52100.1	15	260	298	82.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	144578	147837	.	+	.	ID=Dca48532.1;Parent=Dca48532
scaffold6	Augustus	exon	144578	144664	.	+	.	ID=Dca48532.1.exon1;Parent=Dca48532.1
scaffold6	Augustus	exon	146259	146381	.	+	.	ID=Dca48532.1.exon2;Parent=Dca48532.1
scaffold6	Augustus	exon	146465	146539	.	+	.	ID=Dca48532.1.exon3;Parent=Dca48532.1
scaffold6	Augustus	exon	146857	146922	.	+	.	ID=Dca48532.1.exon4;Parent=Dca48532.1
scaffold6	Augustus	exon	147003	147098	.	+	.	ID=Dca48532.1.exon5;Parent=Dca48532.1
scaffold6	Augustus	exon	147262	147327	.	+	.	ID=Dca48532.1.exon6;Parent=Dca48532.1
scaffold6	Augustus	exon	147547	147639	.	+	.	ID=Dca48532.1.exon7;Parent=Dca48532.1
scaffold6	Augustus	exon	147730	147837	.	+	.	ID=Dca48532.1.exon8;Parent=Dca48532.1