Carnation DB

Dca48549.1

Annotation

11-exons
f-1
sp|C0SUV0_ARATH#Putative uncharacterized protein At1g12840#Arabidopsis thaliana (Mouse-ear cress)#Name=At1g12840#GO:0033180;GO:0016820;GO:0015991#1F1P1C
AT1G12840.1 | Symbols: DET3, ATVHA-C | vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) | chr1:4375584-4378220 FORWARD LENGTH=375
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48549.1	1	377	378	78.04	377	79	5e-177
Target_name	Start	End	Length	Cov(%)
sp\|C0SUV0_ARATH	1	374	375	99.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48549.1	1	377	378	78.04	377	79	4e-178
Target_name	Start	End	Length	Cov(%)
AT1G12840.1	1	374	375	99.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augus-PASA	mRNA	273929	277233	.	+	.	ID=Dca48549.1;Parent=Dca48549
scaffold6	Augus-PASA	exon	273929	274051	.	+	.	ID=Dca48549.1.exon1;Parent=Dca48549.1
scaffold6	Augus-PASA	exon	274144	274212	.	+	.	ID=Dca48549.1.exon2;Parent=Dca48549.1
scaffold6	Augus-PASA	exon	274334	274461	.	+	.	ID=Dca48549.1.exon3;Parent=Dca48549.1
scaffold6	Augus-PASA	exon	274560	274659	.	+	.	ID=Dca48549.1.exon4;Parent=Dca48549.1
scaffold6	Augus-PASA	exon	275408	275475	.	+	.	ID=Dca48549.1.exon5;Parent=Dca48549.1
scaffold6	Augus-PASA	exon	275558	275699	.	+	.	ID=Dca48549.1.exon6;Parent=Dca48549.1
scaffold6	Augus-PASA	exon	275886	276002	.	+	.	ID=Dca48549.1.exon7;Parent=Dca48549.1
scaffold6	Augus-PASA	exon	276230	276355	.	+	.	ID=Dca48549.1.exon8;Parent=Dca48549.1
scaffold6	Augus-PASA	exon	276523	276606	.	+	.	ID=Dca48549.1.exon9;Parent=Dca48549.1
scaffold6	Augus-PASA	exon	276698	276777	.	+	.	ID=Dca48549.1.exon10;Parent=Dca48549.1
scaffold6	Augus-PASA	exon	277134	277233	.	+	.	ID=Dca48549.1.exon11;Parent=Dca48549.1